Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | ISP_007253 | H8F0N6 | Negative | 8120264 - 8121004 | 26765.9 |
| voc family protein | ISP_007254 | Q8ZM36 | Negative | 8121114 - 8121536 | 15534.4 |
| gntr family transcriptional regulator | ISP_007255 | O05494 | Positive | 8121582 - 8122238 | 23976.6 |
| dna/rna non-specific endonuclease | ISP_007256 | P55440 | Negative | 8122242 - 8124164 | 69752.5 |
| coce/nond family hydrolase | ISP_007257 | Q9L9D7 | Negative | 8124297 - 8125913 | 58829.8 |
| tetr/acrr family transcriptional regulator | ISP_007258 | P67443 | Negative | 8125910 - 8126518 | 21762.9 |
| alcohol dehydrogenase catalytic domain-containing protein | ISP_007259 | Q70KF0 | Positive | 8126599 - 8127612 | 34581.5 |
| alpha/beta hydrolase | ISP_007260 | I6YGS0 | Negative | 8127618 - 8128538 | 33355.4 |
| hamp domain-containing protein | ISP_007261 | P9WQ28 | Negative | 8128582 - 8130138 | 53477.4 |
| diiron oxygenase | ISP_007262 | P9WKQ4 | Positive | 8130245 - 8131147 | 34306.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
