Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_007233 | Not Available | Negative | 8101398 - 8101547 | 4967.83 |
| is30 family transposase | ISP_007234 | Not Available | Positive | 8101654 - 8102476 | 29935.5 |
| is30 family transposase | ISP_007235 | A6WFI5 | Negative | 8102549 - 8103209 | 23156.7 |
| tetr/acrr family transcriptional regulator | ISP_007236 | Q9ADP7 | Negative | 8103386 - 8104123 | 25874.8 |
| helix-turn-helix domain-containing protein | ISP_007237 | P49694 | Positive | 8104265 - 8105479 | 44457.3 |
| sdr family oxidoreductase | ISP_007238 | Q8XBJ4 | Positive | 8105558 - 8106325 | 26059.2 |
| sdr family oxidoreductase | ISP_007239 | O53547 | Positive | 8106322 - 8107200 | 30322.0 |
| enoyl-coa hydratase family protein | ISP_007240 | Q0S7P8 | Positive | 8107200 - 8107940 | 26445.5 |
| coa transferase subunit a | ISP_007241 | Q0S7P9 | Positive | 8107930 - 8108793 | 31168.0 |
| coa-transferase | ISP_007242 | Q0S7Q0 | Positive | 8108790 - 8109521 | 26383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
