Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cobaltochelatase | ISP_007223 | P9WPR2 | Negative | 8084185 - 8086125 | 68209.4 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | ISP_007224 | Q9HZU0 | Positive | 8086194 - 8087378 | 40742.7 |
| precorrin-4 c(11)-methyltransferase | ISP_007225 | P21922 | Positive | 8087375 - 8088136 | 26383.8 |
| gfo/idh/moca family oxidoreductase | ISP_007226 | Q148L6 | Positive | 8088133 - 8089149 | 36103.7 |
| cobalt-precorrin-6a reductase | ISP_007227 | Q53139 | Positive | 8089146 - 8089865 | 25960.3 |
| 5,6-dimethylbenzimidazole synthase | ISP_007228 | Q92PC8 | Positive | 8089862 - 8090521 | 24113.8 |
| arabinosyltransferase domain-containing protein | ISP_007229 | P71486 | Positive | 8090540 - 8093632 | 110631.0 |
| is30 family transposase | ISP_007230 | Q7TXL7 | Positive | 8093858 - 8098675 | 168080.0 |
| acyl-coa carboxylase subunit beta | ISP_007231 | P53003 | Positive | 8098675 - 8100252 | 56538.5 |
| esterase family protein | ISP_007232 | P0C1D6 | Positive | 8100262 - 8101236 | 34886.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
