Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyric acid synthase | ISP_007213 | Q6AAP6 | Negative | 8074798 - 8076279 | 51523.4 |
| is30 family transposase | ISP_007214 | P9WP93 | Negative | 8076441 - 8077346 | 31891.2 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | ISP_007215 | Q05599 | Positive | 8077383 - 8078024 | 23018.5 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | ISP_007216 | Q73YK7 | Positive | 8078038 - 8079051 | 34163.2 |
| adenosylcobinamide-gdp ribazoletransferase | ISP_007217 | A1SJN0 | Positive | 8079269 - 8079985 | 22881.5 |
| yafy family transcriptional regulator | ISP_007218 | O34920 | Positive | 8080123 - 8080809 | 25630.0 |
| voc family protein | ISP_007219 | Q9ZAU2 | Negative | 8080793 - 8081149 | 12551.5 |
| rv2231c family pyridoxal phosphate-dependent protein cobc | ISP_007220 | P9WQ88 | Negative | 8081231 - 8082247 | 35420.4 |
| cobyrinate a,c-diamide synthase | ISP_007221 | Q47T68 | Negative | 8082240 - 8083577 | 46095.0 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | ISP_007222 | Q9I472 | Negative | 8083571 - 8084185 | 22726.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
