Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh92 family glycosyl hydrolase | ISP_007203 | O86365 | Negative | 8059000 - 8061702 | 94020.5 |
| yigz family protein | ISP_007204 | P32437 | Negative | 8062002 - 8062649 | 23330.7 |
| glutamate synthase large subunit | ISP_007205 | P96218 | Positive | 8063231 - 8067781 | 165652.0 |
| glutamate synthase subunit beta | ISP_007206 | P9WN18 | Positive | 8067774 - 8069225 | 52441.6 |
| sdr family oxidoreductase | ISP_007207 | Q9Y7K4 | Negative | 8069283 - 8070155 | 30069.9 |
| tetr/acrr family transcriptional regulator | ISP_007208 | P39885 | Positive | 8070239 - 8070811 | 20589.6 |
| dyp-type peroxidase | ISP_007209 | K7N5M8 | Positive | 8071013 - 8072413 | 49892.5 |
| rok family protein | ISP_007210 | Q9KCZ4 | Negative | 8072466 - 8073362 | 30509.5 |
| cbtb-domain containing protein | ISP_007211 | Not Available | Positive | 8073559 - 8073768 | 7597.38 |
| cbta family protein | ISP_007212 | Not Available | Positive | 8073788 - 8074525 | 25441.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
