Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | ISP_007193 | Q8NML3 | Positive | 8050195 - 8051334 | 40404.7 |
| response regulator transcription factor | ISP_007194 | P0AF30 | Positive | 8051331 - 8051963 | 22435.2 |
| php domain-containing protein | ISP_007195 | P44176 | Positive | 8051977 - 8052795 | 28164.6 |
| abc transporter atp-binding protein | ISP_007196 | P0A192 | Positive | 8052914 - 8053723 | 28097.0 |
| abc transporter atp-binding protein | ISP_007197 | P21629 | Positive | 8053711 - 8054550 | 29050.2 |
| branched-chain amino acid abc transporter permease | ISP_007198 | P0AEX8 | Positive | 8054547 - 8055425 | 30394.7 |
| branched-chain amino acid abc transporter permease | ISP_007199 | P21628 | Positive | 8055433 - 8056575 | 39346.6 |
| abc transporter substrate-binding protein | ISP_007200 | Not Available | Positive | 8056572 - 8057822 | 43061.3 |
| hypothetical protein | ISP_007201 | Not Available | Positive | 8058112 - 8058369 | 8814.63 |
| gnat family n-acetyltransferase | ISP_007202 | Q4WF30 | Positive | 8058410 - 8059009 | 22697.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
