Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | ISP_007173 | Q52996 | Negative | 8033334 - 8033657 | 11847.8 |
| is30 family transposase | ISP_007174 | P9WK00 | Positive | 8033772 - 8033921 | 5317.05 |
| phage tail protein | ISP_007175 | Not Available | Positive | 8034081 - 8034542 | 17199.3 |
| translation initiation factor if-1 | ISP_007176 | Q82QK2 | Negative | 8034671 - 8034892 | 8416.33 |
| gnat family n-acetyltransferase | ISP_007177 | P0A946 | Negative | 8034892 - 8035590 | 25153.1 |
| glyoxalase | ISP_007178 | Not Available | Positive | 8035840 - 8036466 | 21585.5 |
| plp-dependent aminotransferase family protein | ISP_007179 | O07578 | Negative | 8036474 - 8037877 | 49830.7 |
| mfs transporter | ISP_007180 | P94577 | Positive | 8037925 - 8039079 | 38656.0 |
| formamidopyrimidine-dna glycosylase | ISP_007181 | B2FU49 | Positive | 8039095 - 8039886 | 28843.3 |
| dinb family protein | ISP_007182 | P14706 | Negative | 8039777 - 8040340 | 19870.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
