Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanw family protein | ISP_007163 | O34611 | Positive | 8022263 - 8024047 | 62333.5 |
| mfs transporter | ISP_007164 | O31695 | Positive | 8024099 - 8025298 | 40717.5 |
| hypothetical protein | ISP_007165 | Not Available | Negative | 8025379 - 8025687 | 11931.8 |
| diguanylate cyclase | ISP_007166 | P0AA90 | Positive | 8025895 - 8027169 | 44763.3 |
| hypothetical protein | ISP_007167 | Not Available | Negative | 8027222 - 8027470 | 8820.01 |
| trpb-like pyridoxal phosphate-dependent enzyme | ISP_007168 | O29028 | Negative | 8027723 - 8029075 | 48804.1 |
| dienelactone hydrolase family protein | ISP_007169 | P27100 | Positive | 8029141 - 8029818 | 23604.8 |
| hypothetical protein | ISP_007170 | Not Available | Positive | 8029943 - 8030356 | 14366.4 |
| hypothetical protein | ISP_007171 | Not Available | Negative | 8030400 - 8032028 | 56273.4 |
| rna polymerase sigma factor | ISP_007172 | Q52997 | Negative | 8032114 - 8033337 | 44455.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
