Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_007153 | Not Available | Negative | 8012258 - 8012506 | 8670.74 |
| lactate 2-monooxygenase | ISP_007154 | P0DUR7 | Negative | 8012625 - 8013788 | 40978.7 |
| saccharopine dehydrogenase nadp-binding domain-containing protein | ISP_007155 | O53176 | Positive | 8013900 - 8015060 | 40771.7 |
| nad(p)/fad-dependent oxidoreductase | ISP_007156 | Q9RKB5 | Negative | 8015047 - 8016522 | 53392.5 |
| tetr family transcriptional regulator | ISP_007157 | Q9KJC4 | Positive | 8016589 - 8017179 | 21289.4 |
| chitosanase | ISP_007158 | P48846 | Positive | 8017355 - 8018200 | 29705.0 |
| php domain-containing protein | ISP_007159 | P94544 | Negative | 8018207 - 8019193 | 35709.6 |
| yfce family phosphodiesterase | ISP_007160 | Q58040 | Negative | 8019203 - 8019706 | 18565.2 |
| gntr family transcriptional regulator | ISP_007161 | O05494 | Negative | 8019703 - 8020356 | 23598.5 |
| l-arabinonate dehydratase | ISP_007162 | P0DOV7 | Positive | 8020434 - 8022146 | 61729.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
