Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | ISP_007073 | Not Available | Positive | 7917161 - 7917964 | 29240.4 |
| choline/carnitine o-acyltransferase | ISP_007074 | P18886 | Positive | 7918029 - 7919765 | 63687.9 |
| alpha/beta hydrolase | ISP_007075 | P71668 | Negative | 7919751 - 7920674 | 32677.6 |
| methyltransferase domain-containing protein | ISP_007076 | Not Available | Negative | 7920671 - 7921453 | 28597.3 |
| discoidin domain-containing protein | ISP_007077 | Not Available | Positive | 7921652 - 7923889 | 76848.6 |
| discoidin domain-containing protein | ISP_007078 | Not Available | Positive | 7923901 - 7926087 | 74561.8 |
| response regulator transcription factor | ISP_007079 | Q04942 | Positive | 7926190 - 7926864 | 24255.6 |
| hamp domain-containing histidine kinase | ISP_007080 | Q04943 | Positive | 7926861 - 7928279 | 50092.3 |
| hypothetical protein | ISP_007081 | Not Available | Positive | 7928436 - 7928951 | 17385.2 |
| hypothetical protein | ISP_007082 | Not Available | Positive | 7928960 - 7929361 | 14002.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
