Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | ISP_007043 | Q52997 | Negative | 7878781 - 7880025 | 44849.4 |
| ycii family protein | ISP_007044 | Q52996 | Negative | 7880022 - 7880405 | 13793.7 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | ISP_007045 | P9WM90 | Positive | 7880559 - 7881224 | 24498.8 |
| l-threonylcarbamoyladenylate synthase | ISP_007046 | P45103 | Negative | 7881228 - 7881848 | 22774.3 |
| duf899 domain-containing protein | ISP_007047 | Not Available | Positive | 7881988 - 7882488 | 17977.3 |
| histidine kinase | ISP_007048 | O34757 | Positive | 7882670 - 7885024 | 84158.3 |
| response regulator transcription factor | ISP_007049 | O34723 | Negative | 7885052 - 7885657 | 21525.4 |
| hypothetical protein | ISP_007050 | Not Available | Negative | 7885962 - 7886138 | 6108.23 |
| arac family transcriptional regulator | ISP_007051 | P43463 | Positive | 7886593 - 7887345 | 26547.2 |
| response regulator transcription factor | ISP_007052 | O34723 | Positive | 7887610 - 7888182 | 20237.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
