Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_007023 | Not Available | Positive | 7854102 - 7854335 | 8236.63 |
| acyl-coa carboxylase subunit epsilon | ISP_007024 | Not Available | Negative | 7854666 - 7854878 | 7401.82 |
| acyl-coa carboxylase subunit beta | ISP_007025 | P53003 | Negative | 7854898 - 7856610 | 61167.7 |
| duf6222 family protein | ISP_007026 | Not Available | Negative | 7856607 - 7856774 | 6011.06 |
| sdr family nad(p)-dependent oxidoreductase | ISP_007027 | Q60A54 | Negative | 7856830 - 7857861 | 35144.3 |
| flavin reductase family protein | ISP_007028 | Q8GME2 | Negative | 7857875 - 7858447 | 20017.7 |
| acyl-coa thioesterase | ISP_007029 | O67466 | Negative | 7858449 - 7858901 | 17284.7 |
| type i polyketide synthase | ISP_007030 | Q7TXK8 | Negative | 7858904 - 7864732 | 205045.0 |
| tigr03084 family metal-binding protein | ISP_007031 | P9WM90 | Negative | 7864980 - 7865786 | 29064.5 |
| carboxymuconolactone decarboxylase family protein | ISP_007032 | Not Available | Negative | 7865977 - 7867050 | 36918.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
