Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368

Gram-positiveFilamentousNon-motileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis mediterranei, specifically the strains Lepetit ME/83, Lepetit ME83/973, and Schering 368, are notable for their habitat in soil environments. These microorganisms are characterized as Gram-positive and possess a filamentous shape, which is typical for many members of the Actinobacteria phylum. They are strictly aerobic, requiring oxygen for growth, and they do not exhibit mobility, meaning they do not move independently within their environment. The presence of flagella in these strains is noteworthy, as it is commonly associated with motility; however, in this case, it may play a role in surface attachment or other ecological interactions rather than in locomotion. These strains are classified as mesophilic, indicating they thrive in moderate temperature ranges, which is typical for soil-dwelling microorganisms. Additionally, Amycolatopsis mediterranei has only one replicon, suggesting a relatively simple genetic structure, which may facilitate genetic stability in natural environments. The accession number for this organism is CP100416.1, which provides a reference for genetic studies. In terms of ecological insight, the filamentous structure and aerobic nature of Amycolatopsis mediterranei suggest that these organisms play a significant role in soil ecosystems, potentially contributing to the breakdown of organic materials and nutrient cycling. Their adaptation to soil habitats and mesophilic conditions indicates their importance in maintaining soil health and supporting biodiversity.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis mediterranei
StrainLepetit ME/83, Lepetit ME83/973, Schering 368

Profile

Physiology
Gram staining propertiesPositive
ShapeFilamentous
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome

Gene Summary

Adenine Count

1464516 bp

Thymine Count

1458769 bp

Guanine Count

3632108 bp

Cytosine Count

3642717 bp

Genome Length

10606055 bp

Protein-coding Genes

9533 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinISP_007023Not AvailablePositive7854102 - 78543358236.63
acyl-coa carboxylase subunit epsilonISP_007024Not AvailableNegative7854666 - 78548787401.82
acyl-coa carboxylase subunit betaISP_007025P53003Negative7854898 - 785661061167.7
duf6222 family proteinISP_007026Not AvailableNegative7856607 - 78567746011.06
sdr family nad(p)-dependent oxidoreductaseISP_007027Q60A54Negative7856830 - 785786135144.3
flavin reductase family proteinISP_007028Q8GME2Negative7857875 - 785844720017.7
acyl-coa thioesteraseISP_007029O67466Negative7858449 - 785890117284.7
type i polyketide synthaseISP_007030Q7TXK8Negative7858904 - 7864732205045.0
tigr03084 family metal-binding proteinISP_007031P9WM90Negative7864980 - 786578629064.5
carboxymuconolactone decarboxylase family proteinISP_007032Not AvailableNegative7865977 - 786705036918.4

Displaying genes 7021 – 7030 of 9594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.