Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | ISP_007013 | H1ZV37 | Negative | 7844613 - 7846058 | 50914.5 |
| mfs transporter | ISP_007014 | P39886 | Negative | 7846129 - 7847577 | 49286.2 |
| epoxide hydrolase 1 | ISP_007015 | Q06816 | Negative | 7847673 - 7848836 | 43039.6 |
| acyl-coa dehydrogenase | ISP_007016 | P26698 | Negative | 7848970 - 7850148 | 42665.6 |
| carboxymuconolactone decarboxylase family protein | ISP_007017 | Not Available | Negative | 7850275 - 7850820 | 19332.2 |
| duf6187 family protein | ISP_007018 | Not Available | Negative | 7850820 - 7851260 | 14876.5 |
| nad(p)-binding domain-containing protein | ISP_007019 | Not Available | Negative | 7851253 - 7852578 | 47978.3 |
| duf6423 family protein | ISP_007020 | Not Available | Negative | 7852603 - 7853103 | 18603.3 |
| duf6235 family protein | ISP_007021 | Not Available | Negative | 7853343 - 7853654 | 11223.4 |
| hypothetical protein | ISP_007022 | Not Available | Negative | 7853791 - 7853934 | 5262.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
