Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ISP_000052 | P94312 | Positive | 52238 - 53044 | 28233.4 |
| abc transporter atp-binding protein | ISP_000053 | Q53193 | Positive | 53041 - 53772 | 26150.8 |
| abc transporter atp-binding protein | ISP_000054 | P42065 | Positive | 53769 - 54542 | 28384.2 |
| aldehyde dehydrogenase family protein | ISP_000055 | A6UVT6 | Positive | 54535 - 55947 | 49374.3 |
| sdr family oxidoreductase | ISP_000056 | C0KTJ6 | Positive | 55944 - 56699 | 26062.0 |
| amidase | ISP_000057 | Q1DCA3 | Positive | 56709 - 58094 | 48329.5 |
| is110 family transposase | ISP_000058 | P19834 | Negative | 58167 - 59312 | 41076.6 |
| rna polymerase sigma factor | ISP_000059 | P66810 | Positive | 59619 - 60140 | 19126.6 |
| cu044_5270 family protein | ISP_000060 | Not Available | Positive | 60133 - 61026 | 31135.3 |
| coa ester lyase | ISP_000061 | B9KNB6 | Negative | 61067 - 61930 | 30946.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
