Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_006983 | Not Available | Negative | 7807095 - 7807343 | 8662.27 |
| hypothetical protein | ISP_006984 | Not Available | Positive | 7807622 - 7807993 | 12995.7 |
| hnh endonuclease | ISP_006985 | Not Available | Negative | 7808152 - 7808790 | 23057.1 |
| mechanosensitive ion channel family protein | ISP_006986 | Q8R6L9 | Positive | 7809044 - 7809994 | 33868.8 |
| globin | ISP_006987 | P0A596 | Positive | 7810086 - 7810487 | 15512.5 |
| glycoside hydrolase family 13 protein | ISP_006988 | P29094 | Positive | 7810484 - 7812034 | 57206.4 |
| hypothetical protein | ISP_006989 | Not Available | Negative | 7812173 - 7812421 | 8883.05 |
| hypothetical protein | ISP_006990 | Not Available | Negative | 7812537 - 7813172 | 22448.9 |
| thioesterase family protein | ISP_006991 | Not Available | Negative | 7813165 - 7813584 | 15355.6 |
| nad-glutamate dehydrogenase | ISP_006992 | A0R1C2 | Negative | 7813581 - 7818587 | 183639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
