Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | ISP_006973 | P39885 | Negative | 7797059 - 7797679 | 21799.9 |
| chaperonin groel | ISP_006974 | A4F749 | Positive | 7797765 - 7799366 | 55694.9 |
| fpg/nei family dna glycosylase | ISP_006975 | P64159 | Negative | 7799377 - 7800183 | 29430.5 |
| ribose-5-phosphate isomerase | ISP_006976 | Q73XM4 | Negative | 7800183 - 7800656 | 17005.9 |
| hypothetical protein | ISP_006977 | Not Available | Positive | 7800702 - 7800950 | 8620.32 |
| mbl fold metallo-hydrolase | ISP_006978 | P25910 | Positive | 7801135 - 7801944 | 29092.0 |
| dsba family protein | ISP_006979 | O53193 | Negative | 7801952 - 7802572 | 23131.3 |
| aminopeptidase n | ISP_006980 | Q11010 | Positive | 7802726 - 7805293 | 94424.4 |
| hypothetical protein | ISP_006981 | Not Available | Negative | 7805393 - 7806178 | 28673.3 |
| duf5130 domain-containing protein | ISP_006982 | A0R1B5 | Negative | 7806620 - 7807108 | 17039.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
