Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_006953 | Not Available | Negative | 7779382 - 7779627 | 8579.8 |
| helix-turn-helix domain-containing protein | ISP_006954 | O31417 | Negative | 7779838 - 7781037 | 43299.8 |
| haloacid dehalogenase-like hydrolase | ISP_006955 | P40852 | Positive | 7781127 - 7781843 | 25544.2 |
| nucleotidyltransferase | ISP_006956 | Not Available | Negative | 7781914 - 7782792 | 32527.6 |
| s-4tm family putative pore-forming effector | ISP_006957 | R8NBR0 | Negative | 7782776 - 7783738 | 35510.6 |
| hypothetical protein | ISP_006958 | R8NBN0 | Positive | 7783901 - 7784779 | 32578.5 |
| sdr family oxidoreductase | ISP_006959 | Q9Y7K4 | Negative | 7785457 - 7786392 | 32184.2 |
| nad(p)-binding domain-containing protein | ISP_006960 | Q5RKL5 | Negative | 7786402 - 7787022 | 20326.4 |
| lysr substrate-binding domain-containing protein | ISP_006961 | P77559 | Positive | 7787161 - 7788072 | 32633.9 |
| tetr/acrr family transcriptional regulator | ISP_006962 | P0ACU8 | Negative | 7788077 - 7788679 | 21771.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
