Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_006943 | Not Available | Negative | 7767799 - 7767999 | 7245.47 |
| type 1 glutamine amidotransferase | ISP_006944 | O06006 | Negative | 7768153 - 7768695 | 19254.8 |
| spoiie family protein phosphatase | ISP_006945 | P37979 | Negative | 7768842 - 7770419 | 54763.9 |
| hamp domain-containing protein | ISP_006946 | Q54YZ9 | Positive | 7770559 - 7775199 | 164794.0 |
| Trna-gly | Not Available | Not Available | Positive | 7775205 - 7775278 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 7775359 - 7775435 | Not Available |
| hypothetical protein | ISP_006949 | Not Available | Positive | 7775491 - 7775910 | 14649.3 |
| hypothetical protein | ISP_006950 | Not Available | Negative | 7776611 - 7777003 | 13803.6 |
| methyltransferase domain-containing protein | ISP_006951 | A8AAV7 | Negative | 7777209 - 7778384 | 42739.4 |
| atp-grasp ribosomal peptide maturase | ISP_006952 | Not Available | Negative | 7778381 - 7779352 | 34663.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
