Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | ISP_006933 | P94490 | Negative | 7758323 - 7759486 | 39654.8 |
| xylose isomerase | ISP_006934 | P24300 | Positive | 7759583 - 7760731 | 42371.1 |
| thua domain-containing protein | ISP_006935 | Not Available | Negative | 7760745 - 7761395 | 23330.1 |
| marr family transcriptional regulator | ISP_006936 | Q7ABA6 | Negative | 7761431 - 7761892 | 16356.4 |
| mfs transporter | ISP_006937 | Q8X625 | Positive | 7762020 - 7763204 | 39368.1 |
| aldo/keto reductase | ISP_006938 | A1UEC6 | Positive | 7763201 - 7764061 | 31446.3 |
| sam-dependent methyltransferase | ISP_006939 | Not Available | Negative | 7764169 - 7765008 | 30806.4 |
| hypothetical protein | ISP_006940 | Not Available | Negative | 7765150 - 7766253 | 37409.9 |
| helix-turn-helix domain-containing protein | ISP_006941 | Q05246 | Negative | 7766745 - 7767170 | 15075.2 |
| hypothetical protein | ISP_006942 | Not Available | Positive | 7767327 - 7767737 | 14795.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
