Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_006923 | Not Available | Positive | 7744143 - 7744754 | 23688.0 |
| atp-binding protein | ISP_006924 | P25941 | Positive | 7744748 - 7745227 | 17185.3 |
| is30 family transposase | ISP_006925 | Not Available | Positive | 7745731 - 7746732 | 37141.5 |
| hypothetical protein | ISP_006926 | Not Available | Negative | 7747224 - 7747418 | 7202.5 |
| gh92 family glycosyl hydrolase | ISP_006927 | O86365 | Negative | 7747551 - 7749836 | 83306.5 |
| amidohydrolase family protein | ISP_006928 | A0A1I9LN01 | Negative | 7750019 - 7751467 | 51164.6 |
| abc transporter permease | ISP_006929 | O05318 | Negative | 7751719 - 7753281 | 53150.7 |
| abc transporter atp-binding protein | ISP_006930 | O86311 | Negative | 7753278 - 7754195 | 33078.6 |
| tetr/acrr family transcriptional regulator | ISP_006931 | O86312 | Negative | 7754192 - 7754806 | 22300.7 |
| s8 family serine peptidase | ISP_006932 | P72186 | Positive | 7755043 - 7758276 | 110279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
