Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is30 family transposase | ISP_006903 | Not Available | Positive | 7726672 - 7726920 | 9404.42 |
| hypothetical protein | ISP_006904 | Not Available | Negative | 7727055 - 7728260 | 44095.0 |
| helix-turn-helix domain-containing protein | ISP_006905 | Not Available | Negative | 7728257 - 7729330 | 40026.8 |
| thiamine-phosphate kinase | ISP_006906 | O27447 | Negative | 7729880 - 7730932 | 36647.4 |
| dctp deaminase | ISP_006907 | A4QHN8 | Negative | 7730916 - 7731518 | 21604.9 |
| hypothetical protein | ISP_006908 | Not Available | Negative | 7731515 - 7732279 | 28007.8 |
| helix-turn-helix domain-containing protein | ISP_006909 | Not Available | Negative | 7732294 - 7733511 | 43878.5 |
| hypothetical protein | ISP_006910 | Not Available | Positive | 7733976 - 7734146 | 6417.79 |
| crp/fnr family transcriptional regulator | ISP_006911 | P9WMH2 | Positive | 7734168 - 7734830 | 23955.0 |
| hypothetical protein | ISP_006912 | Not Available | Positive | 7734910 - 7735182 | 10010.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
