Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_006893 | Not Available | Negative | 7714459 - 7714869 | 14415.9 |
| atp-dependent clp protease atp-binding subunit clpx | ISP_006894 | P0A529 | Negative | 7714920 - 7716215 | 47347.9 |
| atp-dependent clp protease proteolytic subunit | ISP_006895 | Q47MU3 | Negative | 7716449 - 7717102 | 24360.9 |
| atp-dependent clp protease proteolytic subunit | ISP_006896 | Q4JWV4 | Negative | 7717128 - 7717733 | 21888.9 |
| trigger factor | ISP_006897 | A4F9F6 | Negative | 7717872 - 7719263 | 50929.1 |
| tetr/acrr family transcriptional regulator | ISP_006898 | P9WMD4 | Negative | 7719393 - 7719983 | 20768.2 |
| fatty acid desaturase | ISP_006899 | P76081 | Positive | 7720122 - 7722230 | 76866.1 |
| hypothetical protein | ISP_006900 | Not Available | Negative | 7722252 - 7722827 | 17911.5 |
| hamp domain-containing histidine kinase | ISP_006901 | O69729 | Positive | 7723016 - 7724548 | 53737.9 |
| glycosyltransferase family 39 protein | ISP_006902 | O34575 | Positive | 7724649 - 7726493 | 62622.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
