Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdhf/ydep family oxidoreductase | ISP_006883 | P9WJP8 | Positive | 7702861 - 7705200 | 85138.2 |
| hypothetical protein | ISP_006884 | Not Available | Negative | 7705191 - 7705715 | 18074.2 |
| lcp family protein | ISP_006885 | Q8NSD6 | Negative | 7706062 - 7707495 | 49023.3 |
| is30 family transposase | ISP_006886 | Not Available | Negative | 7707547 - 7707672 | 4395.17 |
| ofa family mfs transporter | ISP_006887 | A0LNN5 | Negative | 7707822 - 7709171 | 47741.9 |
| formate dehydrogenase accessory sulfurtransferase fdhd | ISP_006888 | Q73VP7 | Positive | 7709274 - 7710098 | 28919.6 |
| carotenoid oxygenase family protein | ISP_006889 | P9WPR4 | Negative | 7710095 - 7711534 | 52380.8 |
| tetr/acrr family transcriptional regulator | ISP_006890 | Not Available | Positive | 7711606 - 7712313 | 24810.2 |
| alpha/beta hydrolase-fold protein | ISP_006891 | Not Available | Positive | 7712391 - 7713344 | 33741.5 |
| sensor histidine kinase | ISP_006892 | Not Available | Negative | 7713486 - 7714406 | 33072.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
