Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine--trna ligase | ISP_006853 | Q47TB0 | Positive | 7667508 - 7669232 | 62219.9 |
| ppox class f420-dependent oxidoreductase | ISP_006854 | Q46604 | Positive | 7669245 - 7669631 | 14360.2 |
| antibiotic biosynthesis monooxygenase | ISP_006855 | Not Available | Positive | 7669628 - 7669912 | 10282.1 |
| tetr/acrr family transcriptional regulator | ISP_006856 | P96676 | Negative | 7669882 - 7670481 | 21679.9 |
| sdr family oxidoreductase | ISP_006857 | Q49117 | Positive | 7670543 - 7671256 | 24148.9 |
| glutamate 5-kinase | ISP_006858 | C1AVJ9 | Negative | 7671377 - 7672486 | 38069.2 |
| gtpase obge | ISP_006859 | A4F9L3 | Negative | 7672483 - 7673940 | 51241.0 |
| 50s ribosomal protein l27 | ISP_006860 | Q5Z042 | Negative | 7674045 - 7674305 | 9129.93 |
| 50s ribosomal protein l21 | ISP_006861 | A4F9L1 | Negative | 7674349 - 7674663 | 11285.7 |
| translation initiation factor if-2 n-terminal domain-containing protein | ISP_006862 | A0R152 | Negative | 7674827 - 7677769 | 105377.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
