Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4231 domain-containing protein | ISP_006843 | Not Available | Positive | 7656465 - 7656971 | 18627.2 |
| comec/rec2 family competence protein | ISP_006844 | P39695 | Negative | 7656984 - 7659350 | 80607.0 |
| comea family dna-binding protein | ISP_006845 | P39694 | Negative | 7659901 - 7660611 | 24052.0 |
| degv family protein | ISP_006846 | Q9RDL7 | Negative | 7660748 - 7661605 | 29319.2 |
| gdsl-type esterase/lipase family protein | ISP_006847 | K5BJH8 | Negative | 7661610 - 7662338 | 25410.8 |
| histidine phosphatase family protein | ISP_006848 | A1TC01 | Negative | 7662342 - 7662956 | 22369.4 |
| ribosome silencing factor | ISP_006849 | Q9KD89 | Negative | 7662953 - 7663348 | 14410.9 |
| nicotinate-nucleotide adenylyltransferase | ISP_006850 | A4F9M5 | Negative | 7663409 - 7663978 | 21296.1 |
| recq family atp-dependent dna helicase | ISP_006851 | P40724 | Positive | 7664176 - 7666287 | 76010.5 |
| is30 family transposase | ISP_006852 | Not Available | Positive | 7666476 - 7667374 | 30987.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
