Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | ISP_006833 | Not Available | Positive | 7647350 - 7647796 | 15913.9 |
| hypothetical protein | ISP_006834 | Not Available | Positive | 7647824 - 7648405 | 21146.8 |
| uma2 family endonuclease | ISP_006835 | Not Available | Negative | 7648412 - 7648981 | 20728.7 |
| translation elongation factor 4 | ISP_006836 | A3Q2A6 | Negative | 7649132 - 7650982 | 68235.1 |
| class i sam-dependent methyltransferase | ISP_006837 | P96576 | Positive | 7651098 - 7651718 | 21750.0 |
| voc family protein | ISP_006838 | Not Available | Negative | 7651715 - 7652089 | 13509.2 |
| eama family transporter | ISP_006839 | Not Available | Negative | 7652113 - 7652976 | 29595.0 |
| 30s ribosomal protein s20 | ISP_006840 | A4F9N6 | Positive | 7653309 - 7653569 | 9376.39 |
| dna polymerase iii subunit delta | ISP_006841 | P71730 | Negative | 7653802 - 7654782 | 34059.8 |
| threonine synthase | ISP_006842 | Q58860 | Positive | 7655076 - 7656341 | 44815.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
