Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease n | ISP_006823 | P00650 | Negative | 7637637 - 7638101 | 16285.3 |
| hypothetical protein | ISP_006824 | Q49760 | Negative | 7638113 - 7638313 | 7333.92 |
| zinc-binding dehydrogenase | ISP_006825 | O35017 | Positive | 7638373 - 7639338 | 34344.1 |
| alpha/beta hydrolase | ISP_006826 | I6XU97 | Positive | 7639475 - 7640515 | 37120.8 |
| amino acid permease | ISP_006827 | Q797A7 | Positive | 7640606 - 7642048 | 50412.6 |
| nitronate monooxygenase | ISP_006828 | Q6GB05 | Negative | 7642045 - 7643094 | 36333.3 |
| marr family winged helix-turn-helix transcriptional regulator | ISP_006829 | C5BE36 | Negative | 7643186 - 7643695 | 18979.5 |
| family 20 glycosylhydrolase | ISP_006830 | Q7WUL4 | Positive | 7643804 - 7645576 | 61825.7 |
| pentapeptide repeat-containing protein | ISP_006831 | Not Available | Positive | 7645648 - 7646874 | 44009.1 |
| hit domain-containing protein | ISP_006832 | Not Available | Positive | 7646899 - 7647309 | 14772.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
