Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoadenylyl-sulfate reductase | ISP_006813 | A0R0W2 | Positive | 7627339 - 7628034 | 25126.5 |
| sulfate adenylyltransferase subunit cysd | ISP_006814 | Q9X5U0 | Positive | 7628046 - 7628966 | 34922.0 |
| gtp-binding protein | ISP_006815 | P9WNM4 | Positive | 7628966 - 7630228 | 44790.2 |
| sirohydrochlorin chelatase | ISP_006816 | O87690 | Positive | 7630225 - 7630962 | 25465.5 |
| hypothetical protein | ISP_006817 | Not Available | Positive | 7631072 - 7631275 | 6993.71 |
| atp-binding protein | ISP_006818 | B2RGR5 | Negative | 7631280 - 7634924 | 135885.0 |
| cyclase | ISP_006819 | Not Available | Positive | 7635267 - 7635896 | 20496.4 |
| duf3291 domain-containing protein | ISP_006820 | Not Available | Positive | 7635941 - 7636444 | 18654.0 |
| enoyl-coa hydratase family protein | ISP_006821 | Q3MIE0 | Positive | 7636483 - 7637250 | 26806.0 |
| barstar family protein | ISP_006822 | O07938 | Negative | 7637269 - 7637640 | 13184.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
