Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | ISP_006793 | Not Available | Positive | 7607644 - 7608480 | 30933.6 |
| duf397 domain-containing protein | ISP_006794 | Not Available | Positive | 7608482 - 7608697 | 7605.8 |
| duf4173 domain-containing protein | ISP_006795 | Not Available | Negative | 7608729 - 7610324 | 55442.2 |
| atp-binding protein | ISP_006796 | P30847 | Negative | 7610407 - 7611399 | 35545.0 |
| response regulator transcription factor | ISP_006797 | Q9ZEP4 | Negative | 7611396 - 7612088 | 24994.3 |
| ncs1 family nucleobase:cation symporter-1 | ISP_006798 | P94575 | Positive | 7612309 - 7613874 | 56494.9 |
| acyltransferase | ISP_006799 | Q9XGI9 | Positive | 7613885 - 7614667 | 29157.2 |
| dihydropyrimidinase | ISP_006800 | O69809 | Positive | 7614667 - 7616049 | 48857.9 |
| tigr03842 family llm class f420-dependent oxidoreductase | ISP_006801 | Q8PZ66 | Positive | 7616057 - 7617055 | 36112.9 |
| alpha/beta hydrolase | ISP_006802 | Q9FCD7 | Positive | 7617127 - 7618587 | 51329.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
