Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloregulator arsr/smtb family transcription factor | ISP_006763 | P9WMI4 | Positive | 7583422 - 7583787 | 12660.3 |
| transcriptional repressor | ISP_006764 | P9WN84 | Positive | 7583787 - 7584200 | 15158.7 |
| hypothetical protein | ISP_006765 | Not Available | Negative | 7584197 - 7584964 | 27123.7 |
| tigr03943 family protein | ISP_006766 | Not Available | Negative | 7585016 - 7585753 | 25790.9 |
| permease | ISP_006767 | P94395 | Negative | 7585750 - 7586763 | 34824.9 |
| hypothetical protein | ISP_006768 | Not Available | Negative | 7586884 - 7587309 | 14574.4 |
| isoprenyl transferase | ISP_006769 | Q82BS5 | Negative | 7587306 - 7588121 | 30838.9 |
| dna repair protein reco | ISP_006770 | A4F9T9 | Negative | 7588163 - 7589041 | 31081.2 |
| cd225/dispanin family protein | ISP_006771 | Not Available | Negative | 7589102 - 7589596 | 16986.5 |
| rdd family protein | ISP_006772 | P9WIM6 | Negative | 7589668 - 7590768 | 38479.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
