Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyguanosinetriphosphate triphosphohydrolase | ISP_006753 | A1TBP6 | Negative | 7573523 - 7574797 | 45432.9 |
| ydcf family protein | ISP_006754 | Not Available | Negative | 7574830 - 7575483 | 23522.3 |
| response regulator transcription factor | ISP_006755 | O34723 | Negative | 7575508 - 7576113 | 20907.2 |
| sensor histidine kinase | ISP_006756 | Q795K2 | Negative | 7576110 - 7577312 | 43037.3 |
| abc transporter permease | ISP_006757 | O07017 | Negative | 7577332 - 7578072 | 26649.6 |
| abc transporter atp-binding protein | ISP_006758 | O07016 | Negative | 7578069 - 7579001 | 32439.1 |
| glycine--trna ligase | ISP_006759 | Q6A964 | Negative | 7579200 - 7580588 | 52806.2 |
| class f sortase | ISP_006760 | Not Available | Negative | 7580679 - 7581332 | 22649.7 |
| class f sortase | ISP_006761 | Not Available | Negative | 7581412 - 7582059 | 22347.6 |
| hypothetical protein | ISP_006762 | Not Available | Negative | 7582060 - 7583148 | 36766.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
