Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chab family protein | ISP_006723 | Not Available | Positive | 7546227 - 7546625 | 14672.2 |
| hypothetical protein | ISP_006724 | Not Available | Negative | 7546979 - 7547224 | 8975.35 |
| nad(p)-dependent oxidoreductase | ISP_006725 | F4I907 | Positive | 7547320 - 7548183 | 29399.2 |
| acetate/propionate family kinase | ISP_006726 | Q2JRF6 | Negative | 7548528 - 7549613 | 38507.0 |
| phosphoketolase family protein | ISP_006727 | Q89S87 | Negative | 7549601 - 7551895 | 82576.9 |
| hemerythrin domain-containing protein | ISP_006728 | Not Available | Positive | 7551999 - 7552550 | 20711.7 |
| bacteriocin family protein | ISP_006729 | Q2RVS0 | Positive | 7552552 - 7553370 | 29166.4 |
| glutathione-dependent formaldehyde dehydrogenase | ISP_006730 | P47734 | Negative | 7553845 - 7555059 | 42456.3 |
| Trna-tyr | Not Available | Not Available | Positive | 7555277 - 7555361 | Not Available |
| hypothetical protein | ISP_006732 | Not Available | Negative | 7555435 - 7555575 | 4832.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
