Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antar domain-containing protein | ISP_006693 | P9WGE0 | Positive | 7517144 - 7518310 | 41552.7 |
| is30 family transposase | ISP_006694 | Q7CU92 | Positive | 7518418 - 7518510 | 3522.21 |
| gaf and antar domain-containing protein | ISP_006695 | Not Available | Negative | 7518599 - 7519336 | 25134.1 |
| hypothetical protein | ISP_006696 | Not Available | Positive | 7519927 - 7520187 | 8668.87 |
| gaf domain-containing protein | ISP_006697 | Not Available | Negative | 7520194 - 7520937 | 25595.6 |
| antar domain-containing protein | ISP_006698 | Not Available | Negative | 7520957 - 7521673 | 25475.2 |
| gaf and antar domain-containing protein | ISP_006699 | Not Available | Positive | 7522045 - 7522782 | 26108.7 |
| gaf and antar domain-containing protein | ISP_006700 | Not Available | Negative | 7522807 - 7523547 | 26425.1 |
| hypothetical protein | ISP_006701 | Not Available | Positive | 7523691 - 7523924 | 9065.92 |
| duf2188 domain-containing protein | ISP_006702 | Not Available | Negative | 7523958 - 7524179 | 8072.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
