Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | ISP_000652 | Q825I8 | Negative | 678978 - 680189 | 44720.5 |
| cytochrome p450 | ISP_000653 | Q00441 | Negative | 680220 - 681485 | 46593.0 |
| lipopolysaccharide biosynthesis protein rfbh | ISP_000654 | Q9ALN8 | Negative | 681559 - 682866 | 47468.6 |
| glycosyltransferase | ISP_000655 | Q9L9F5 | Positive | 683003 - 684214 | 43008.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase family protein | ISP_000656 | P29783 | Positive | 684245 - 684865 | 22531.9 |
| aspartate aminotransferase family protein | ISP_000657 | O34662 | Negative | 684923 - 686221 | 45246.4 |
| gfo/idh/moca family oxidoreductase | ISP_000658 | B3TMR8 | Negative | 686246 - 687238 | 34666.6 |
| tigr03621 family f420-dependent llm class oxidoreductase | ISP_000659 | Q58929 | Positive | 687386 - 688270 | 31773.1 |
| llm class flavin-dependent oxidoreductase | ISP_000660 | Q53218 | Positive | 688297 - 689367 | 39934.6 |
| ndp-hexose 2,3-dehydratase family protein | ISP_000661 | Q9RR31 | Positive | 689502 - 690869 | 51296.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
