Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | ISP_006673 | P67748 | Negative | 7496687 - 7497184 | 18126.5 |
| helix-turn-helix domain-containing protein | ISP_006674 | A0A0H2ZIC3 | Negative | 7497739 - 7498674 | 33391.4 |
| hd domain-containing protein | ISP_006675 | P22143 | Positive | 7498747 - 7499403 | 23371.6 |
| rida family protein | ISP_006676 | P39332 | Positive | 7499549 - 7499962 | 15309.3 |
| hypothetical protein | ISP_006677 | Q8KU07 | Negative | 7500233 - 7500472 | 8563.1 |
| gaf and antar domain-containing protein | ISP_006678 | Not Available | Positive | 7501145 - 7501828 | 24250.4 |
| heavy metal translocating p-type atpase | ISP_006679 | P59947 | Negative | 7502428 - 7504644 | 77018.9 |
| heavy-metal-associated domain-containing protein | ISP_006680 | O32620 | Negative | 7504845 - 7505051 | 7144.5 |
| sigma-70 family rna polymerase sigma factor | ISP_006681 | P66810 | Positive | 7505198 - 7505773 | 20904.8 |
| sigma-70 family rna polymerase sigma factor | ISP_006682 | P66810 | Negative | 7505781 - 7506353 | 21028.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
