Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nmra family nad(p)-binding protein | ISP_006663 | Q8KU07 | Positive | 7487051 - 7487896 | 29089.8 |
| sdr family oxidoreductase | ISP_006664 | P39315 | Positive | 7487950 - 7488822 | 31090.5 |
| cupin domain-containing protein | ISP_006665 | Not Available | Positive | 7488851 - 7489372 | 19099.2 |
| dj-1/pfpi family protein | ISP_006666 | Q8G9F9 | Negative | 7489480 - 7490130 | 22092.5 |
| alpha/beta hydrolase | ISP_006667 | P95125 | Negative | 7490196 - 7491263 | 37708.8 |
| alpha/beta hydrolase | ISP_006668 | P9WK86 | Positive | 7491589 - 7492539 | 32982.5 |
| dha2 family efflux mfs transporter permease subunit | ISP_006669 | Q8Y9K8 | Positive | 7492557 - 7493981 | 48616.0 |
| sdr family nad(p)-dependent oxidoreductase | ISP_006670 | Q9ZAU1 | Positive | 7493981 - 7494823 | 30003.7 |
| sdr family oxidoreductase | ISP_006671 | P30043 | Positive | 7494826 - 7495551 | 25509.7 |
| nuclear transport factor 2 family protein | ISP_006672 | P0CH63 | Negative | 7495599 - 7496660 | 37265.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
