Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_006653 | Not Available | Positive | 7478721 - 7479173 | 16157.5 |
| abc transporter atp-binding protein | ISP_006654 | P54592 | Positive | 7479211 - 7480137 | 32609.6 |
| abc transporter permease subunit | ISP_006655 | Not Available | Positive | 7480137 - 7480985 | 29620.6 |
| histidine kinase | ISP_006656 | P55183 | Positive | 7481007 - 7482254 | 43696.6 |
| response regulator transcription factor | ISP_006657 | P55184 | Positive | 7482251 - 7482922 | 24040.1 |
| hypothetical protein | ISP_006658 | Not Available | Negative | 7483137 - 7483886 | 27001.5 |
| hypothetical protein | ISP_006659 | P31758 | Positive | 7484336 - 7484734 | 13742.7 |
| hypothetical protein | ISP_006660 | Not Available | Negative | 7485079 - 7485654 | 19612.0 |
| helix-turn-helix transcriptional regulator | ISP_006661 | P9WMG0 | Negative | 7485961 - 7486296 | 12268.8 |
| tetr/acrr family transcriptional regulator | ISP_006662 | P39885 | Negative | 7486336 - 7486971 | 23170.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
