Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_006643 | Not Available | Positive | 7469975 - 7470235 | 9601.67 |
| is30 family transposase | ISP_006644 | Q5W7C1 | Positive | 7470951 - 7471133 | 6146.55 |
| hypothetical protein | ISP_006645 | Not Available | Negative | 7471100 - 7471540 | 14838.4 |
| deda family protein | ISP_006646 | P0ABP7 | Negative | 7471684 - 7472316 | 22307.8 |
| hypothetical protein | ISP_006647 | Not Available | Positive | 7472701 - 7472922 | 7071.46 |
| undecaprenyl-diphosphate phosphatase | ISP_006648 | P60939 | Positive | 7472944 - 7473849 | 31725.1 |
| blai/meci/copy family transcriptional regulator | ISP_006649 | P9WMJ4 | Positive | 7473875 - 7474249 | 13883.4 |
| m56 family metallopeptidase | ISP_006650 | Not Available | Positive | 7474246 - 7475181 | 32156.2 |
| septal ring lytic transglycosylase rlpa family protein | ISP_006651 | P19435 | Positive | 7475441 - 7476751 | 42538.9 |
| alkaline phosphatase family protein | ISP_006652 | Not Available | Negative | 7476801 - 7478432 | 56188.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
