Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muconolactone delta-isomerase family protein | ISP_006633 | Not Available | Negative | 7462116 - 7462316 | 7282.65 |
| stas domain-containing protein | ISP_006634 | P9WGE0 | Positive | 7462792 - 7463205 | 15084.6 |
| stas domain-containing protein | ISP_006635 | Not Available | Positive | 7463531 - 7463845 | 11219.7 |
| sensor histidine kinase | ISP_006636 | Not Available | Positive | 7463842 - 7464780 | 33846.2 |
| atp-binding protein | ISP_006637 | Not Available | Positive | 7464879 - 7465319 | 15870.7 |
| helix-turn-helix domain-containing protein | ISP_006638 | P96602 | Positive | 7465501 - 7465932 | 15514.5 |
| atp-binding cassette domain-containing protein | ISP_006639 | P54592 | Positive | 7466077 - 7467015 | 32893.5 |
| abc transporter permease | ISP_006640 | Not Available | Positive | 7467012 - 7467851 | 28655.5 |
| sensor histidine kinase | ISP_006641 | P55183 | Positive | 7467922 - 7469253 | 47432.8 |
| response regulator transcription factor | ISP_006642 | P55184 | Positive | 7469250 - 7469927 | 24148.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
