Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp/gtp-binding protein | ISP_006553 | Q58735 | Positive | 7368187 - 7368744 | 20236.7 |
| hypothetical protein | ISP_006554 | Not Available | Positive | 7369057 - 7370007 | 34696.0 |
| hypothetical protein | ISP_006555 | Q9ZCW2 | Positive | 7370029 - 7370658 | 23909.9 |
| hypothetical protein | ISP_006556 | Not Available | Positive | 7370655 - 7371476 | 29370.7 |
| rna polymerase sigma-70 factor | ISP_006557 | L0TCG5 | Negative | 7371768 - 7372640 | 31977.7 |
| doxx family protein | ISP_006558 | Not Available | Negative | 7372655 - 7373032 | 12574.8 |
| tetr/acrr family transcriptional regulator | ISP_006559 | P42097 | Positive | 7373137 - 7373694 | 19756.6 |
| cupin domain-containing protein | ISP_006560 | Not Available | Positive | 7373712 - 7374440 | 25739.3 |
| duf1996 domain-containing protein | ISP_006561 | Not Available | Positive | 7374704 - 7376482 | 62086.9 |
| glycoside hydrolase family 43 protein | ISP_006562 | A7LXT8 | Positive | 7376550 - 7377980 | 51545.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
