Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | ISP_006543 | Q04778 | Negative | 7358628 - 7359353 | 25934.0 |
| duf5997 family protein | ISP_006544 | Not Available | Positive | 7359396 - 7359767 | 13523.2 |
| aminotransferase class v-fold plp-dependent enzyme | ISP_006545 | P83788 | Positive | 7359784 - 7360983 | 42668.0 |
| marr family transcriptional regulator | ISP_006546 | P96625 | Positive | 7361058 - 7361495 | 15880.1 |
| haloalkane dehalogenase | ISP_006547 | Q8U671 | Positive | 7361506 - 7362336 | 30087.6 |
| tetr/acrr family transcriptional regulator | ISP_006548 | Not Available | Negative | 7362356 - 7362982 | 21777.4 |
| fatty acid desaturase | ISP_006549 | O31250 | Negative | 7362984 - 7364402 | 52503.1 |
| nitrate- and nitrite sensing domain-containing protein | ISP_006550 | Not Available | Positive | 7364924 - 7367323 | 85929.8 |
| roadblock/lc7 domain-containing protein | ISP_006551 | O50393 | Positive | 7367377 - 7367802 | 15028.1 |
| duf742 domain-containing protein | ISP_006552 | Not Available | Positive | 7367799 - 7368170 | 13210.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
