Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | ISP_006523 | Not Available | Positive | 7339412 - 7339900 | 18151.7 |
| sigma-70 family rna polymerase sigma factor | ISP_006524 | P66812 | Positive | 7340047 - 7340643 | 21608.9 |
| lysr substrate-binding domain-containing protein | ISP_006525 | P36771 | Negative | 7340640 - 7341473 | 30618.2 |
| bile acid:sodium symporter | ISP_006526 | P39879 | Positive | 7341570 - 7342538 | 33413.2 |
| hypothetical protein | ISP_006527 | Not Available | Negative | 7342647 - 7342916 | 9293.38 |
| Trna-met | Not Available | Not Available | Positive | 7343103 - 7343176 | Not Available |
| multicopper oxidase domain-containing protein | ISP_006529 | Q53692 | Negative | 7343516 - 7345453 | 70440.7 |
| cytochrome p450 | ISP_006530 | Q825I8 | Negative | 7345459 - 7346661 | 43841.9 |
| helix-turn-helix domain-containing protein | ISP_006531 | Not Available | Positive | 7347045 - 7347524 | 17428.4 |
| is630 family transposase | ISP_006532 | Not Available | Positive | 7347413 - 7348195 | 29906.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
