Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ISP_006513 | A4QH19 | Positive | 7329444 - 7330349 | 33199.8 |
| coa transferase | ISP_006514 | G0HQ31 | Positive | 7330468 - 7331604 | 40431.0 |
| crotonase/enoyl-coa hydratase family protein | ISP_006515 | Q8Z9L5 | Positive | 7331617 - 7332366 | 25908.3 |
| acetoacetate decarboxylase | ISP_006516 | P23670 | Positive | 7332363 - 7333109 | 27436.0 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | ISP_006517 | Q93RX5 | Positive | 7333106 - 7334032 | 33154.4 |
| acyl-coa dehydrogenase family protein | ISP_006518 | Q96329 | Positive | 7334034 - 7335230 | 43918.6 |
| lcp family protein | ISP_006519 | Q8NSD6 | Negative | 7335235 - 7336464 | 41320.9 |
| sdr family nad(p)-dependent oxidoreductase | ISP_006520 | P9WGR2 | Negative | 7336672 - 7337415 | 25782.3 |
| sigma-70 family rna polymerase sigma factor | ISP_006521 | P9WGG4 | Positive | 7337455 - 7338492 | 37988.1 |
| whib family transcriptional regulator | ISP_006522 | P9WF42 | Negative | 7338630 - 7338893 | 9374.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
