Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase/phosphoenolpyruvate mutase family protein | ISP_006493 | P9WLN8 | Negative | 7309414 - 7310178 | 25743.7 |
| ph domain-containing protein | ISP_006494 | Not Available | Negative | 7310188 - 7311156 | 33747.4 |
| is30 family transposase | ISP_006495 | O34381 | Positive | 7311216 - 7311395 | 6460.88 |
| gpp34 family phosphoprotein | ISP_006496 | Not Available | Negative | 7311604 - 7312254 | 22950.7 |
| histidine kinase | ISP_006497 | P94438 | Positive | 7312425 - 7313660 | 43226.1 |
| response regulator transcription factor | ISP_006498 | P55184 | Positive | 7313635 - 7314285 | 22768.6 |
| m50 family metallopeptidase | ISP_006499 | Not Available | Negative | 7314282 - 7314989 | 24512.2 |
| helix-turn-helix transcriptional regulator | ISP_006500 | P0ACN2 | Negative | 7315065 - 7315436 | 13844.5 |
| srpbcc family protein | ISP_006501 | Not Available | Negative | 7315477 - 7315899 | 15606.6 |
| tetr/acrr family transcriptional regulator | ISP_006502 | O86312 | Positive | 7315923 - 7316453 | 18920.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
