Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase family protein | ISP_006483 | Not Available | Negative | 7299728 - 7300549 | 28732.4 |
| 30s ribosome-binding factor rbfa | ISP_006484 | Q0S217 | Negative | 7300553 - 7301029 | 17203.0 |
| duf503 domain-containing protein | ISP_006485 | P32730 | Negative | 7301049 - 7301342 | 10767.0 |
| translation initiation factor if-2 | ISP_006486 | A4FM34 | Negative | 7301426 - 7304440 | 103030.0 |
| ylxr family protein | ISP_006487 | Not Available | Negative | 7304519 - 7304836 | 11543.1 |
| transcription termination factor nusa | ISP_006488 | Q9Z5J1 | Negative | 7304914 - 7305960 | 37596.5 |
| ribosome maturation factor rimp | ISP_006489 | A4FM36 | Negative | 7305957 - 7306499 | 19356.9 |
| ferritin-like domain-containing protein | ISP_006490 | Not Available | Positive | 7306609 - 7307544 | 31211.0 |
| hypothetical protein | ISP_006491 | Not Available | Negative | 7307581 - 7308255 | 23485.9 |
| aminotransferase class v-fold plp-dependent enzyme | ISP_006492 | P42253 | Negative | 7308359 - 7309372 | 35226.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
