Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | ISP_006463 | Not Available | Negative | 7281143 - 7281601 | 17039.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | ISP_006464 | Q5YSW2 | Negative | 7281598 - 7282338 | 25722.9 |
| insulinase family protein | ISP_006465 | P9WHT5 | Negative | 7282335 - 7283699 | 49071.5 |
| polyribonucleotide nucleotidyltransferase | ISP_006466 | A4FM22 | Negative | 7283786 - 7286047 | 80189.8 |
| 30s ribosomal protein s15 | ISP_006467 | A4FM23 | Negative | 7286295 - 7286564 | 10292.7 |
| rna 2',3'-cyclic phosphodiesterase | ISP_006468 | Q5SHB1 | Negative | 7286708 - 7287211 | 18173.6 |
| helix-turn-helix domain-containing protein | ISP_006469 | Not Available | Negative | 7287211 - 7287684 | 17434.1 |
| bifunctional riboflavin kinase/fad synthetase | ISP_006470 | Q59263 | Negative | 7287764 - 7288747 | 35477.0 |
| trna pseudouridine(55) synthase trub | ISP_006471 | Q5YSE0 | Negative | 7288775 - 7289608 | 29215.9 |
| gnat family n-acetyltransferase | ISP_006472 | Not Available | Positive | 7289745 - 7290209 | 17017.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
