Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_006453 | Not Available | Positive | 7273847 - 7274017 | 5402.45 |
| winged helix dna-binding domain-containing protein | ISP_006454 | P75843 | Negative | 7274561 - 7275775 | 44981.3 |
| gnat family n-acetyltransferase | ISP_006455 | Not Available | Positive | 7275835 - 7276392 | 19681.9 |
| is30 family transposase | ISP_006456 | Not Available | Negative | 7276459 - 7276761 | 10685.2 |
| hypothetical protein | ISP_006457 | Not Available | Positive | 7277007 - 7277525 | 19223.0 |
| duf397 domain-containing protein | ISP_006458 | Not Available | Negative | 7277490 - 7277669 | 6567.87 |
| scr1 family ta system antitoxin-like transcriptional regulator | ISP_006459 | Not Available | Negative | 7277682 - 7278515 | 30597.1 |
| hypothetical protein | ISP_006460 | Not Available | Negative | 7278539 - 7279291 | 25432.9 |
| lysr substrate-binding domain-containing protein | ISP_006461 | P71318 | Negative | 7279288 - 7280139 | 30276.5 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | ISP_006462 | Q59727 | Positive | 7280210 - 7281157 | 35528.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
