Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding and vwa domain-containing protein | ISP_006443 | Not Available | Negative | 7262570 - 7264213 | 57045.3 |
| ribonuclease j | ISP_006444 | A0QVT2 | Negative | 7264367 - 7265956 | 56851.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ISP_006445 | O86841 | Negative | 7266061 - 7267074 | 35088.6 |
| serine/threonine protein kinase | ISP_006446 | P65727 | Negative | 7267165 - 7268646 | 52388.7 |
| hypothetical protein | ISP_006447 | Not Available | Negative | 7268997 - 7269458 | 17085.1 |
| nramp family divalent metal transporter | ISP_006448 | P9WIZ4 | Negative | 7269455 - 7270696 | 42414.1 |
| act domain-containing protein | ISP_006449 | A6NHX0 | Negative | 7270824 - 7271219 | 13810.6 |
| fad-dependent thymidylate synthase | ISP_006450 | A0QIT4 | Negative | 7271219 - 7271971 | 27638.6 |
| type ii toxin-antitoxin system hicb family antitoxin | ISP_006451 | Not Available | Positive | 7272091 - 7272612 | 17779.9 |
| duf4097 family beta strand repeat-containing protein | ISP_006452 | Not Available | Positive | 7272625 - 7273548 | 31172.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
