Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_006433 | Not Available | Negative | 7252178 - 7252489 | 10882.9 |
| rlob family protein | ISP_006434 | Not Available | Negative | 7252659 - 7253165 | 18680.2 |
| atp-binding protein | ISP_006435 | Not Available | Negative | 7253231 - 7254448 | 45497.5 |
| dna translocase ftsk | ISP_006436 | O05560 | Negative | 7254530 - 7257019 | 89006.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | ISP_006437 | Q42870 | Positive | 7257248 - 7258063 | 29395.9 |
| nad(p)h:quinone oxidoreductase | ISP_006438 | Q9RYU4 | Positive | 7258097 - 7258711 | 21501.2 |
| hypothetical protein | ISP_006439 | Not Available | Negative | 7258750 - 7259352 | 20439.3 |
| hypothetical protein | ISP_006440 | Not Available | Negative | 7259398 - 7260048 | 21703.8 |
| eama family transporter | ISP_006441 | E1W9W8 | Positive | 7260218 - 7261165 | 32726.1 |
| amino acid permease | ISP_006442 | P46349 | Positive | 7261243 - 7262616 | 49242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
