Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf58 domain-containing protein | ISP_006413 | Not Available | Positive | 7230981 - 7232255 | 45348.8 |
| duf3488 and transglutaminase-like domain-containing protein | ISP_006414 | P94476 | Positive | 7232575 - 7235139 | 90522.5 |
| duf3040 domain-containing protein | ISP_006415 | Not Available | Negative | 7235413 - 7235814 | 14869.2 |
| dna polymerase iv | ISP_006416 | Q9AK82 | Negative | 7236080 - 7237294 | 42869.0 |
| methyltransferase domain-containing protein | ISP_006417 | Q8XDG3 | Negative | 7237464 - 7238189 | 24845.4 |
| para family protein | ISP_006418 | Q72H90 | Positive | 7238296 - 7239189 | 32113.1 |
| endonuclease viii | ISP_006419 | O86820 | Positive | 7239193 - 7240002 | 29854.1 |
| adenosine deaminase | ISP_006420 | Q82K09 | Positive | 7240126 - 7241172 | 37338.7 |
| gnat family n-acetyltransferase | ISP_006421 | P94482 | Positive | 7241539 - 7242099 | 20803.8 |
| quinone-dependent dihydroorotate dehydrogenase | ISP_006422 | A8LY18 | Positive | 7242165 - 7243202 | 35937.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
